Wall clock time and date at job start Wed Apr 15 2020 11:47:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35715 * 117.00257 * 2 1 4 4 C 1.39180 * 119.85846 * 0.02562 * 3 2 1 5 5 C 1.36542 * 120.37750 * 179.74721 * 4 3 2 6 6 C 1.39895 * 120.07966 * 0.50905 * 5 4 3 7 7 C 1.47205 * 120.14228 * 179.74200 * 6 5 4 8 8 O 1.21653 * 120.00137 * 179.72949 * 7 6 5 9 9 N 1.34777 * 119.99637 * 359.72641 * 7 6 5 10 10 C 1.36929 * 119.99797 * 179.72303 * 9 7 6 11 11 H 1.08001 * 120.00178 * 0.27712 * 10 9 7 12 12 C 1.39004 * 120.00340 * 180.27676 * 10 9 7 13 13 N 1.31394 * 119.99651 * 0.02562 * 12 10 9 14 14 Si 1.86795 * 120.00255 * 180.02562 * 12 10 9 15 15 H 1.48493 * 109.47327 * 60.00145 * 14 12 10 16 16 H 1.48502 * 109.47317 * 180.02562 * 14 12 10 17 17 H 1.48506 * 109.47211 * 300.00278 * 14 12 10 18 18 C 1.40380 * 119.71806 * 359.47098 * 6 5 4 19 19 O 1.35657 * 120.18471 * 180.29412 * 18 6 5 20 20 C 1.42902 * 116.99982 * 180.02562 * 19 18 6 21 21 F 1.39906 * 109.46837 * 299.99581 * 20 19 18 22 22 F 1.39895 * 109.47509 * 59.99558 * 20 19 18 23 23 C 1.38458 * 119.62914 * 0.27578 * 18 6 5 24 24 H 1.08997 * 109.47024 * 180.02562 * 1 2 3 25 25 H 1.08999 * 109.46686 * 300.00285 * 1 2 3 26 26 H 1.08998 * 109.47196 * 60.00179 * 1 2 3 27 27 H 1.08006 * 119.81248 * 0.02562 * 4 3 2 28 28 H 1.07999 * 119.96310 * 180.25920 * 5 4 3 29 29 H 0.97001 * 120.00485 * 0.02562 * 9 7 6 30 30 H 0.96999 * 119.99875 * 180.02562 * 13 12 10 31 31 H 1.08996 * 109.47066 * 180.02562 * 20 19 18 32 32 H 1.07997 * 120.04728 * 179.97438 * 23 18 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0452 1.2092 0.0000 4 6 1.2844 2.3746 0.0005 5 6 1.8932 3.5968 0.0057 6 6 3.2894 3.6845 -0.0002 7 6 3.9473 5.0014 -0.0003 8 8 5.1616 5.0748 -0.0005 9 7 3.2042 6.1258 -0.0003 10 6 3.8161 7.3508 0.0053 11 1 4.8941 7.4160 0.0052 12 6 3.0498 8.5105 0.0111 13 7 1.7382 8.4313 0.0118 14 14 3.8845 10.1816 0.0181 15 1 4.7310 10.3171 -1.1944 16 1 2.8533 11.2501 0.0243 17 1 4.7330 10.3061 1.2305 18 6 4.0605 2.5115 -0.0002 19 8 5.4150 2.5856 0.0001 20 6 6.1324 1.3496 -0.0006 21 9 5.7959 0.6146 1.1413 22 9 5.7963 0.6159 -1.1433 23 6 3.4307 1.2784 -0.0002 24 1 -0.3633 -1.0276 0.0005 25 1 -0.3633 0.5139 0.8900 26 1 -0.3633 0.5138 -0.8900 27 1 0.2061 2.3120 0.0014 28 1 1.2963 4.4968 0.0104 29 1 2.2359 6.0674 0.0002 30 1 1.2035 9.2405 0.0155 31 1 7.2035 1.5513 0.0002 32 1 4.0173 0.3716 -0.0007 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000170609082.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Wed Apr 15 2020 11:47:13 Heat of formation + Delta-G solvation = -187.295883 kcal Electronic energy + Delta-G solvation = -22727.803696 eV Core-core repulsion = 18711.086309 eV Total energy + Delta-G solvation = -4016.717387 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 287.080 amu Computer time = 0.32 seconds Orbital eigenvalues (eV) -49.22235 -47.20657 -40.33747 -38.88413 -37.80673 -36.06905 -33.97213 -31.51458 -30.54038 -29.76831 -27.43962 -25.99291 -24.97211 -23.02517 -21.96604 -19.83488 -19.09877 -18.11705 -17.86972 -17.76627 -17.07181 -16.58282 -15.79078 -15.78966 -15.13349 -14.72381 -14.43703 -14.09907 -13.88495 -13.86866 -13.61844 -13.56110 -13.05614 -13.04278 -12.68499 -12.42012 -12.10385 -11.93593 -11.88351 -11.56732 -11.12709 -10.81359 -10.69979 -10.46276 -10.23926 -9.55286 -8.55737 -8.40341 -8.04413 -7.89202 -6.50994 -3.83961 1.29759 1.50678 2.79707 3.18310 3.19114 3.23150 3.27778 3.57160 3.61600 4.12215 4.44273 4.46670 4.78989 4.82972 4.84156 5.05479 5.07670 5.09239 5.33116 5.35624 5.42405 5.52673 5.64812 5.93351 6.31275 6.39020 6.60437 6.65938 7.15790 7.43230 7.47792 8.00688 8.56321 9.11568 9.47445 10.03846 10.66517 Molecular weight = 287.08amu Principal moments of inertia in cm(-1) A = 0.018379 B = 0.005012 C = 0.004040 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1523.132734 B = 5585.323927 C = 6928.651639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.316 6.316 3 C 0.161 3.839 4 C -0.233 4.233 5 C -0.032 4.032 6 C -0.149 4.149 7 C 0.477 3.523 8 O -0.581 6.581 9 N -0.550 5.550 10 C -0.291 4.291 11 H 0.107 0.893 12 C 0.022 3.978 13 N -0.895 5.895 14 Si 0.935 3.065 15 H -0.272 1.272 16 H -0.283 1.283 17 H -0.272 1.272 18 C 0.183 3.817 19 O -0.272 6.272 20 C 0.402 3.598 21 F -0.203 7.203 22 F -0.203 7.203 23 C -0.235 4.235 24 H 0.098 0.902 25 H 0.057 0.943 26 H 0.057 0.943 27 H 0.132 0.868 28 H 0.141 0.859 29 H 0.392 0.608 30 H 0.275 0.725 31 H 0.180 0.820 32 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.672 -14.786 -0.009 14.880 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 O -0.229 6.229 3 C 0.115 3.885 4 C -0.252 4.252 5 C -0.051 4.051 6 C -0.153 4.153 7 C 0.265 3.735 8 O -0.466 6.466 9 N -0.185 5.185 10 C -0.421 4.421 11 H 0.124 0.876 12 C -0.181 4.181 13 N -0.536 5.536 14 Si 0.761 3.239 15 H -0.197 1.197 16 H -0.209 1.209 17 H -0.197 1.197 18 C 0.136 3.864 19 O -0.187 6.187 20 C 0.311 3.689 21 F -0.185 7.185 22 F -0.185 7.185 23 C -0.255 4.255 24 H 0.116 0.884 25 H 0.076 0.924 26 H 0.076 0.924 27 H 0.150 0.850 28 H 0.158 0.842 29 H 0.226 0.774 30 H 0.085 0.915 31 H 0.197 0.803 32 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.820 -14.600 -0.010 14.623 hybrid contribution -0.694 0.558 0.006 0.891 sum -1.514 -14.042 -0.004 14.124 Atomic orbital electron populations 1.23074 0.78294 1.03737 1.01711 1.85998 1.21463 1.27015 1.88410 1.18681 0.91263 0.84125 0.94433 1.20836 1.00167 0.91953 1.12198 1.20828 0.92745 0.97854 0.93686 1.19757 0.92516 0.93140 1.09917 1.17353 0.87310 0.83024 0.85841 1.90641 1.13005 1.86567 1.56420 1.41844 1.09056 1.04804 1.62824 1.19760 0.94145 0.81622 1.46574 0.87553 1.25335 0.95396 1.00234 0.97098 1.69589 1.04208 1.30502 1.49258 0.85851 0.78513 0.80296 0.79227 1.19736 1.20878 1.19740 1.18451 0.81467 0.92453 0.93984 1.87021 1.16427 1.28221 1.86982 1.23562 0.97767 0.75934 0.71612 1.93078 1.94309 1.78803 1.52286 1.93075 1.94313 1.78858 1.52218 1.20529 0.93204 0.96954 1.14776 0.88391 0.92418 0.92410 0.85004 0.84162 0.77351 0.91546 0.80330 0.84101 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.24 9.80 101.05 0.99 1.23 16 2 O -0.32 -4.32 10.48 -18.85 -0.20 -4.51 16 3 C 0.16 2.53 6.69 -39.05 -0.26 2.27 16 4 C -0.23 -3.47 8.96 -39.84 -0.36 -3.83 16 5 C -0.03 -0.55 9.48 -39.57 -0.38 -0.93 16 6 C -0.15 -3.13 5.89 -104.83 -0.62 -3.74 16 7 C 0.48 12.08 7.70 -12.62 -0.10 11.99 16 8 O -0.58 -16.40 14.73 -16.67 -0.25 -16.64 16 9 N -0.55 -14.23 5.23 -12.01 -0.06 -14.30 16 10 C -0.29 -8.10 9.68 -14.99 -0.15 -8.24 16 11 H 0.11 3.07 7.15 -52.49 -0.38 2.70 16 12 C 0.02 0.58 5.50 -17.46 -0.10 0.48 16 13 N -0.90 -23.81 13.05 55.50 0.72 -23.09 16 14 Si 0.93 20.67 29.55 -169.99 -5.02 15.65 16 15 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 16 H -0.28 -6.10 7.11 56.52 0.40 -5.70 16 17 H -0.27 -5.98 7.11 56.52 0.40 -5.58 16 18 C 0.18 3.57 6.49 -38.69 -0.25 3.32 16 19 O -0.27 -5.18 8.50 -40.57 -0.34 -5.53 16 20 C 0.40 5.47 5.98 101.05 0.60 6.08 16 21 F -0.20 -2.87 15.58 2.25 0.04 -2.83 16 22 F -0.20 -2.87 15.59 2.25 0.04 -2.83 16 23 C -0.24 -4.03 8.19 -39.32 -0.32 -4.35 16 24 H 0.10 0.64 8.14 -51.93 -0.42 0.22 16 25 H 0.06 0.47 7.65 -51.93 -0.40 0.07 16 26 H 0.06 0.47 7.65 -51.93 -0.40 0.07 16 27 H 0.13 1.53 6.26 -52.48 -0.33 1.20 16 28 H 0.14 2.33 6.39 -52.49 -0.34 1.99 16 29 H 0.39 9.52 5.91 -40.82 -0.24 9.28 16 30 H 0.27 6.89 8.31 -40.82 -0.34 6.55 16 31 H 0.18 1.58 8.14 -51.93 -0.42 1.16 16 32 H 0.14 2.27 5.11 -52.49 -0.27 2.00 16 LS Contribution 289.10 15.07 4.36 4.36 Total: -1.00 -33.10 289.10 -3.97 -37.07 By element: Atomic # 1 Polarization: 10.71 SS G_CDS: -2.32 Total: 8.39 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: -0.93 Total: 4.27 kcal Atomic # 7 Polarization: -38.05 SS G_CDS: 0.66 Total: -37.39 kcal Atomic # 8 Polarization: -25.90 SS G_CDS: -0.79 Total: -26.68 kcal Atomic # 9 Polarization: -5.73 SS G_CDS: 0.07 Total: -5.66 kcal Atomic # 14 Polarization: 20.67 SS G_CDS: -5.02 Total: 15.65 kcal Total LS contribution 4.36 Total: 4.36 kcal Total: -33.10 -3.97 -37.07 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000170609082.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -150.225 kcal (2) G-P(sol) polarization free energy of solvation -33.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.322 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.974 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.071 kcal (6) G-S(sol) free energy of system = (1) + (5) -187.296 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.32 seconds